NEWOur work on loop extrusion by condensin is out in Nature Communication! NEWRFOT theory for glassy dynamics of a single condensed polymer NEWHIPPS method for 3D genome structure reconstruction is published

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A note on how I generate publication page programmatically

This site was built around September 2019. Two months before then, I knew absolutely nothing about Javascript, HTML, and CSS. Now I can say I know something about HTML and CSS and still too little about Javascript.

This is part III of a series of three posts about optimizing python code. The particular example given is the computation of pair-wise distances under periodic boundary condition which is an essential part of molecular dynamics simulations. In this post, I show how to use Numpy to do the computat…